1. What are the k-mers of length k = 21 for this sequence read in FASTQ...

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Biology

1. What are the k-mers of length k = 21 for this sequence readin FASTQ format?
@K000384:75:HM57CBBXX:1:1101:25530:13841:N:0:GTGGCC
CTGGCACTGGGCTTCAAGCTGGGCTACCTTCTGTTT
+
AAFFFJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJ
[please be detailed, thanks]

Answer & Explanation Solved by verified expert

4.3 Ratings (839 Votes)

Answer-

FASTA format is a text-based format for representing either nucleotide sequencesor peptide sequences, in which base pairs or amino acids are represented using single-letter codes. A sequence in FASTA format begins with a single-line description, followed by lines of sequence data.

FASTA format need to be searched from the NCBI

website

https://www.ncbi.nlm.nih.gov

Then select the search as Nucleotide.

After that paste the sequence to get the FASTA Sequence.

ATTGACAGAACCTTGACCCTGGCCACAGGCTGGGCTCTGCCCTGACTGTGGGTGAGTGGCTTGCTTGGCT
					CACCTGGCTGGTGGCTGGGCTGGGTCTCAGTTCAGGTGTGTGTGATTAGGAGGCAGCCATGCAGGACCTT
					TTGTTAGTGGCAGAAGAAACTTCAGGGGACAAGGTAGTTGGAAGTGACTGATTTCCCAGCGGGGAGGACT
					TCAAGAATGTTCCTTTTCCCAGCTTTGAGTTTCTCTGGGTTGTACTGGGAGAGGCTCTTAGAGAGGTGGG
					TGTAGGGAAGGGAGCCCTCTGCCCTCTCTACATCCGTCTCCCGGGGTGGGTCCCAGAGCCCTGGCGGTGG
					GGCCCCATGACTCCTCTTGAGCAAAGACTGCAAGTGTCAACTTTTCTAAAGGTGCAGGTTCCCCGTTCAC
					TCCAGTTCATCACTGGTTCCTCAAGGGACCACCTGGATTTTATCCTGCTTCAAGTCATCCTAATCCATTC
					TCTAATTTGGATCGGGATGTGAGGCTGCTGAGCAAGAGTGGTAAGCCACTTTCTGACCTCATTTCCTCAC
					GGGGATAGGTAAGCCTGCCTGTAGACTTGGATGAGAGCAAGTACCTGCACAGGGCTGGGCACAGACAAGG
					GACAGTTGCTGTGGGGCTTGACATGAAGTAGTGTGTCACGTATTTTCACTGAACCAGACTCATTACACTC
					TGGAGGCTGGCTCAGCATGGAACCTTCTAGAAAGGCAAGGCTCCCACCATACCCAAAGCTATGAGTGGCC
					CCATGAGCTGTTTCTGATCTCCAGGCTGGATTGAGACCCAGCCACAACACCAGCTGGACCCTGTCTCCTC
					AGTGATTTTCCTAAAGTGTGCTTTCCTAGGCTGGGTGTATGGGGGACAGGGGTCGCAGGGCTGGAGCTTG
					GGGGGTGGCAGGTGGCAGGGATGGCTGGAGGGCATGCTGAATGCTCTGAATCCTGACTGCCTTCTCCCTT
					TCCGTTTCTGGCCAATCCTGTACTGGCATCTTTCTCCACCGATGGTCCAATTACAGTGCTTGATTACCTG
					GACGAAACAATGGAAGGTAGGCCCCCAGACCA

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